Gene Validator beta

Identify Problems with Gene Predictions



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1 100%
gi|514746961|ref|XM_005019748.1| PREDICTED: Anas platyrhynchos insulin (INS), mRNA 199 108 [105, 111] 0.39 1:199; slope=-0.21 pval=1.0 yes (%=100) 0% missing, 1% extra, 95% conserved
7 33%
Brasy-EspV1T00061 200 466 [376, 377] 0.01 (too long) 1:200; 2:400; slope=0.0 pval=1.0 no (%=49) 23% missing, 37% extra, 46% conserved
3 33%
gi|251823817|ref|NM_010785.2| Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 1, mRNA 186 1023 [650, 730] 0.01 (too long) 3:200; 1:2; 2:1; slope=0.0 pval=1.0 no (%=72) 5% missing, 34% extra, 22% conserved
6 33%
Brasy-EspV1T00022 139 1625 [541, 923] 0.0 (too long) 3:98; 1:125; slope=0.0 pval=1.0 no (%=71) 7% missing, 29% extra, 18% conserved
8 33%
Brasy-EspV1T00037 200 1325 [698, 888] 0.01 (too long) 2:494; 1:1; -2:1; slope=0.0 pval=1.0 no (%=56) 15% missing, 35% extra, 26% conserved
13 67%
Brasy-EspV1T00042 89 226 [731, 1057] 0.01 (too short) 1:88; -2:1; slope=-0.01 pval=1.0 yes (%=100) 61% missing, 0% extra, 40% conserved
10 33%
Brasy-EspV1T00039 200 1618 [657, 1057] 0.0 (too long) 2:299; 1:1; slope=0.34 pval=1.0 no (%=49) 12% missing, 45% extra, 28% conserved
9 33%
Brasy-EspV1T00038 200 1325 [585, 888] 0.01 (too long) 2:498; 1:1; -2:1; slope=0.0 pval=1.0 no (%=56) 16% missing, 35% extra, 26% conserved
12 33%
Brasy-EspV1T00041 200 1620 [728, 1057] 0.0 (too long) 2:302; 1:1; slope=0.34 pval=1.0 no (%=49) 13% missing, 45% extra, 27% conserved
11 33%
Brasy-EspV1T00040 200 1253 [585, 888] 0.01 (too long) 2:498; 1:1; -3:1; slope=0.0 pval=1.0 no (%=60) 17% missing, 33% extra, 26% conserved
2 17%
gi|514746961|ref|XM_005019748.1|dup PREDICTED: Anas platyrhynchos insulin (INS), mRNA 200 163 [101, 111] 0.05 (too long) 2:201; 1:200; slope=-0.15 pval=0.0 no (%=61) 3% missing, 36% extra, 79% conserved
5 17%
gi|251823817|ref|NM_010785.2|dup2 Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 1, mRNA 185 1303 [650, 730] 0.0 (too long) 1:178; 3:180; 2:151; slope=0.0 pval=0.0 no (%=37) 2% missing, 46% extra, 79% conserved
4 17%
gi|251823817|ref|NM_010785.2|dup Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 1, mRNA 186 1327 [650, 730] 0.0 (too long) 1:185; 3:189; 2:2; slope=0.0 pval=0.0 no (%=48) 1% missing, 47% extra, 93% conserved